Initial import

1 files changed, 215 insertions, 0 deletions

diff --git a/Makefile.bookup b/Makefile.bookup
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+#
+# Parameters
+#
+# Customize to your needs in your main Makefile. Examples:
+#
+# 	BOOKUP  = vendor/bookup
+# 	OUTPUT  = my-essay
+# 	OUTPUT  = essay
+# 	WEBSITE = some.hostname
+
+# Bookup base folder
+BOOKUP ?= .
+
+# Project name
+PROJECT ?= bookup
+
+# Output file names (prefix)
+OUTPUT ?= $(PROJECT)
+
+# Destination website hostname (for rsync+ssh)
+WEBSITE ?= $(PROJECT)
+
+#
+# Exclusion patterns
+#
+
+#EXCLUDES = --exclude=.htpasswd
+#EXCLUDES = --exclude=Makefile.local
+EXCLUDES  = archive
+
+#
+# Metadata
+#
+
+REVISION = $(shell git describe --tags 2> /dev/null || git log -1 --format=oneline | cut -d ' ' -f 1)
+DATE     = $(shell date)
+YEAR     = $(shell date +%Y)
+
+#
+# Phony targets
+#
+
+.PHONY: archive
+
+#
+# Default target
+#
+
+all: submodules book clean
+	@true
+
+#
+# Archive
+#
+
+archive:
+	@$(BOOKUP)/bin/archive
+
+#
+# Cleanup
+#
+
+clean:
+	@true
+	@rm -f $(OUTPUT).aux $(OUTPUT).log $(OUTPUT).nav $(OUTPUT).out $(OUTPUT).snm $(OUTPUT).tex $(OUTPUT).toc $(OUTPUT).vrb
+	@rm -f index.md index.Rmd
+	@rm -f _main.log _main.tex _main.loe _main.Rmd
+	@rm -rf _book _bookdown_files
+
+#
+# Submodules
+#
+
+submodules:
+	@git submodule update --init --recursive
+
+#
+# Metadata
+#
+
+metadata:
+	@mkdir -p           .metadata
+	@echo $(REVISION) > .metadata/revision.txt
+	@echo $(DATE)     > .metadata/date.txt
+	@echo $(YEAR)     > .metadata/year.txt
+
+#
+# Compilation
+#
+
+compile_book: metadata
+	@rm -f $(OUTPUT).md
+	@#cat sections/*.md  >> $(OUTPUT).md
+	@/bin/bash -c 'cat _bookup.yml >> essays.md ; echo "" >> $(OUTPUT).md'
+	@/bin/bash -c 'cat _biblio.yml >> essays.md ; echo "" >> $(OUTPUT).md'
+	@/bin/bash -c 'for file in $(BOOKUP)/structure/00*.yml; do cat $$file >> essays.md ; echo "---" >> essays.md; done'
+	@/bin/bash -c 'for file in $(BOOKUP)/structure/00*.md; do cat $$file >> $(OUTPUT).md ; echo "" >> $(OUTPUT).md; done'
+	@/bin/bash -c 'for file in content/published/*/*.md; do cat $$file >> $(OUTPUT).md ; echo "" >> $(OUTPUT).md ; cat templates/references.md >> $(OUTPUT).md ; echo "" >> $(OUTPUT).md; done'
+	@/bin/bash -c 'for file in $(BOOKUP)/structure/99*.md; do cat $$file >> $(OUTPUT).md ; echo "" >> $(OUTPUT).md; done'
+	@sed -i -e "s|%%revision%%|$(REVISION)|g" -e "s|%%date%%|$(DATE)|g" $(OUTPUT).md
+	@#sed -i -f snippets/terminology.sed $(OUTPUT).md
+	@ln -sf $(OUTPUT).md $(OUTPUT).Rmd
+
+compile: compile_book move_book
+	@true
+
+#
+# Main bookdown targets
+#
+
+bookdown_clean:
+	@rm -f _main.Rmd
+
+bookdown_html:
+	@# Needs to backup the index.html to avoid overwriting
+	@#mv index.html index.html.old
+
+	# Cleanup
+	@#rm -rf $(OUTPUT)/html $(OUTPUT)/$(OUTPUT).html
+	@rm -rf compiled
+
+	# Fix references
+	# Use sed to fix a weird reference issue on fig.cap inside knitr blocks that are not properly converted.
+	# Not using "sed -i" since it yields a permission denied error when running inside a guest VM.
+	# This fix no longer works with citeproc.
+	@#cp $(OUTPUT).md $(OUTPUT).md.base
+	@#sed -e 's/\\\\citet{\([^}]*\)}/@\1/g' $(OUTPUT).md > $(OUTPUT).new && mv $(OUTPUT).new $(OUTPUT).md
+
+	# Build
+	Rscript -e 'bookdown::render_book("$(OUTPUT).md", "bookdown::gitbook")'
+
+	# Restore $(OUTPUT).md after the weird reference fix
+	@#mv $(OUTPUT).md.base $(OUTPUT).md
+
+	# See https://stackoverflow.com/questions/58340924/bookdown-generates-index-file-with-a-chapter-title-instead-of-index-html-when
+	# Fixed using section ID naming in the preamble
+	#@cd _book && ln -s "início.html" index.html
+	@#mv _book $(OUTPUT)/html
+	@#mv index.html.old index.html
+	@mv _book compiled
+
+	# Replace fuse.js from CDN to local
+	# This ensures the HTML output can be browsed offline
+	#@find $(OUTPUT)/html -name *.html -exec sed -i -e 's|https://cdn.jsdelivr.net/npm/fuse.js@[^"]*|../../vendor/Fuse.js/dist/fuse.min.js|' {} \;
+	@mkdir compiled/js
+	@cp vendor/Fuse.js/dist/fuse.min.js compiled/js
+	@find compiled -name *.html -exec sed -i -e 's|https://cdn.jsdelivr.net/npm/fuse.js@[^"]*|js/fuse.min.js|' {} \;
+
+  # Add revision information
+	@echo $(REVISION) > compiled/revision
+
+	# Add symlink to the archive and to the slides
+	# This symlink is useful for checking things in localhost
+	# But it tends to be replaced during remote deployment
+	@cd compiled && ln -s ../archive
+	@cd compiled && ln -s ../slides
+
+bookdown_pdf:
+	# Cleanup old builds
+	@rm -rf _book/_main.pdf
+
+	# Build
+	@Rscript -e 'bookdown::render_book("$(OUTPUT).md", "bookdown::tufte_book2")'
+
+	# Move
+	@#mv _main.pdf $(OUTPUT).pdf
+	@#mv _book/_main.pdf $(OUTPUT)/$(OUTPUT).pdf
+	@mv _book/_main.pdf compiled/$(OUTPUT).pdf
+
+# Use sed to convert tufte::margin_note to marginfigure
+# Also, "sed -i" yields a permission denied error when running inside a guest VM.
+bookdown_epub:
+	@# EPUB format is broken right now
+	@true
+
+	# Fix margin notes
+	@#sed -e 's/r tufte::margin_note/marginfigure/' $(OUTPUT).md > $(OUTPUT).new && mv $(OUTPUT).new $(OUTPUT).md
+
+	# Build
+	@#Rscript -e 'bookdown::render_book("$(OUTPUT).md", "bookdown::epub_book")'
+
+	# Move
+	@##mv _book/_main.epub $(OUTPUT)/$(OUTPUT).epub
+	@#mv _book/_main.epub compiled/$(OUTPUT)s.epub
+
+	# Cleanup
+	@#rm _book/reference-keys.txt
+	@#rmdir _book
+
+bookdown: bookdown_clean bookdown_html bookdown_pdf bookdown_epub
+
+#
+# Build the essays
+#
+
+move_book:
+	@mv $(OUTPUT).* compiled/
+
+book: archive compile_book bookdown move_book clean
+
+#
+# Remote copies
+#
+
+web_deploy:
+	@rsync -avz --delete $(EXCLUDES) ./compiled/ $(WEBSITE):/
+	@rsync -avz --delete             ./archive/  $(WEBSITE):/archive/
+	@rsync -avz --delete             ./slides/   $(WEBSITE):/slides/
+
+#
+# Offline copies
+#
+
+usb_stick:
+	sudo rsync -av --exclude=backups --delete ./ /media/usb/$(PROJECT)/